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Standard Error
•
reset
4
votes
14
replies
17k
views
standard error value (lfcSE) returned by DeSeq2
deseq2
deseq
lfc
lfcse
standard error
updated 7.1 years ago by
rraadd_8
• 0 • written 7.2 years ago by
tootiki
• 0
10
votes
11
replies
7.7k
views
Standard error and effect size from Limma
effect size
Limma
toptable
Standard Error
updated 8.8 years ago by
Gordon Smyth
50k • written 8.8 years ago by
Vani
▴ 20
9
votes
6
replies
10k
views
Error bars DESeq or DESeq2 fold change
rnaseq
deseq2
deseq
standard error
confidence interval
updated 2.5 years ago by
Michael Love
42k • written 8.1 years ago by
lisa.crossman
▴ 10
0
votes
6
replies
2.5k
views
paired analysis using metagenomeSeq
metagenomeseq
logfc
paired samples
standard error
updated 21 months ago by
tom830979
• 0 • written 7.6 years ago by
manasishah86
▴ 30
2
votes
4
replies
1.3k
views
Standard error of log2FC from DESeq in time series experiment
deseq2
log2fc
standard error
timecourse
updated 6.2 years ago by
ellascottgm
• 0 • written 6.2 years ago by
Verena
• 0
2
votes
4
replies
2.2k
views
Problem obtaining standard error from limma
limma
standard error
7.9 years ago
José Luis Lavín
▴ 10
0
votes
3
replies
2.0k
views
Standard errors of fitted values from glmFit in edgeR
edger
standard error
glmfit
7.9 years ago
david.hughes
• 0
7 results • Page
1 of 1
Recent ...
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Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Mike Smith
★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★ 3.3k
From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …
Comment: deseq2 results
by
ATpoint
★ 4.1k
> the results are not satisfactory to me Well, what is your question? The DESeq2 vignette covers how to do analysis, and some diagnostics…
Comment: Extremely small p-values using Limma for proteomic data
by
ATpoint
★ 4.1k
It's not an implementation problem I am discussing (it's trivial obviously) -- more that for most purposes the y-axis metric should be the …
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
Answer: Cannot connect to ExperimentHub server
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